ALMaSS: AlleleFreq Class Reference

Class to handle statistics and constructs based on allele frequencies. More...

#include <GeneticMaterial.h>

Public Member Functions
	AlleleFreq ()

int	SupplyAN (int loc, int al)

Protected Attributes
int	AlleleNumber [32][16]

float	AlleleFrequency [32][16]

float	HE [32]

float	HO [32]

int	NoAlleles [32]

Detailed Description

Class to handle statistics and constructs based on allele frequencies.

Constructor & Destructor Documentation

◆ AlleleFreq()

AlleleFreq::AlleleFreq ( )

                         {
   FILE * FreqFile = fopen("GeneticFrequencies.txt", "r" );
   int data;
   if ( !FreqFile ) {
     g_msg->Warn( "GeneticFrequencies File missing", "" );
     exit( 0 );
   }
   for ( int i = 0; i < 16; i++ ) {
     for ( int j = 0; j < 4; j++ ) {
       fscanf( FreqFile, "%d", & data );
       AlleleNumber[ i ] [ j ] = data;
     }
   }
   for ( int i = 16; i < 32; i++ ) {
     for ( int j = 0; j < 16; j++ ) {
       fscanf( FreqFile, "%d", & data );
       AlleleNumber[ i ] [ j ] = data;
     }
   }
   fclose( FreqFile );
 }